CLI commands#

Top-level commands#

Table 1 Top-level commands#

Command

Description

auth

Authentication commands
To view the full list of subcommands, see Authentication subcommands.

datahub

Data Hub commands
To view the full list of subcommands, see Data Repository Service (DRS) subcommands.

jobs

Workflow Execution Service (WES) commands
To view the full list of subcommands, see Work Execution Service (WES) subcommands.

tools

Tool Registry Service (TRS) commands
To view the full list of subcommands, see Tool Registry Service (TRS) subcommands.

workspace

Workspace commands
To view the full list of subcommands, see Workspace subcommands.

scr

SeqsLab Container Registry commands To view the full list of subcommands, see scr subcommands.

Optional arguments#

Table 2 Optional arguments#

Argument

Description

-h, help

show this help message and exit

config CONFIG, -c CONFIG

Configuration File

backend BACKEND, -b BACKEND

Platform backend, ex: ‘azure’

proxy PROXY, -p PROXY

Web proxy

verbose, -v

Increase verbosity, can be specified multiple times

stderr, -s

By default the logging output goes to a temporary file. This disables this feature by sending the logging output to stderr